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Services: Genomics & Transcriptomics

Services for research on COVID-19

Laniakea: is a cloud service that enables researchers to generate and use private instances of the Galaxy workflow manager. Users can create their own customized version of Covid-Galaxy and take advantage of the tools therein incorporated for analyzing the viral genomes and its evolution in an environment over which they have complete control. Go to this page to request access.

ELIXIR-IT HPC@CINECA: it’s a High Performance Computing (HPC) service offered to Italian and European researchers by ELIXIR-IT through Cineca’s cutting edge clusters. Users get access to a command line work environment preconfigured with tens of bioinformatics software and a reference data repository. To access this service you need to fill this form. Applications are usually processed in seven working days.

CorGAT: CorGAT is a genomic sequence analysis system that facilitates the comparison between viral genomes and their annotation. The tool is available both as “stand-alone” software and through a user friendly web interface. Annotations provided by CorGAT are curated manually and are regularly updated by the developers. A complete and detailed manual that describes the usage of CorGAT is available on readthedocs.

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